Links

Scattered links on varying subjects...


Big fat lie


Weight Loss Predictor


Conjugation Techniques / Handbooks

# Bioconjugate Techniques

# Molecular Probes Handbook
http://www.invitrogen.com.sci-hub.org/site/us/en/home/References/Molecular-Probes-The-Handbook.html  (Catálogo Molecular Probes - preencher formulário e enviar)

# GE (saudosa Pharmacia) Handbooks

# Thermo/Pierce Hanbooks (especial atenção para crosslinking & conjugation)





Food for Thought
http://www.thirteen.org/naturally-obsessed/


Cloning 


CD spectra from pdb files
http://comp.chem.nottingham.ac.uk/dichrocalc/

Wiki-style PXDR tutorial
- http://capsicum.colgate.edu/chwiki/tiki-index.php?page=Protein+X-ray+Crystallography+Methods

FITYK - http://fityk.nieto.pl/
MolSoft WebBrowser - http://www.molsoft.com/

Structural Analysis and Validation Server (procheck, whatcheck, etc) - http://nihserver.mbi.ucla.edu/SAVES/
   (ou atraves do PDBsum - vide abaixo)

PepX: a structural database of protein-peptide complexes - http://pepx.switchlab.org/

PDBe Statistics Analysis

Bio3D

IUPred - http://iupred.enzim.hu/
PHYRE Protein Folding Predicter - http://www.sbg.bio.ic.ac.uk/~phyre/
Dali Database http://ekhidna.biocenter.helsinki.fi/dali/
The Dali Database is based on all-against-all 3D structure comparison of protein structures in the Protein Data Bank (PDB). The structural neighbourhoods and alignments are automatically maintained and regularly updated using the Dali search engine.

Mustang-MR Server for structural alignment of multiple protein structures - http://pxgrid.med.monash.edu.au:8080/mustangserver/

Multiple sequence alignment
http://www.ebi.ac.uk/Tools/muscle/index.html
http://mafft.cbrc.jp/alignment/server/

PyMOL - http://www.pymol.org/rel/099/

Swiss PDB Viewer
- http://spdbv.vital-it.ch/

Electron Density Server (EDS): http://eds.bmc.uu.se/eds/
PDB: http://www.pdb.org/
PDBsum (and LigPlot): http://www.ebi.ac.uk/pdbsum/

HotPatch: http://hotpatch.mbi.ucla.edu/

European Bioinformatics Institute - http://www.ebi.ac.uk/
Center for Biological Sequence Analysis (CBS) - http://www.cbs.dtu.dk/services/
SignalP Server - http://www.cbs.dtu.dk/services/SignalP-3.0/
TMHMM Server - http://www.cbs.dtu.dk/services/TMHMM/

Regional Order Neural Network (RONN) - http://www.strubi.ox.ac.uk/RONN

Expasy: http://expasy.org/
             http://expasy.org/tools/
ProtParam: http://expasy.org/tools/protparam.html


Muscle (alinhamento): http://www.drive5.com/muscle/

http://www.jcsg.org/

Xtal Pred


Plotting
   QtiPlot: binaries from ALBA Synchrotron and IF-UFRJ
   SciDAVIS: http://scidavis.sourceforge.net/

Crystallography

   EVAL15 - http://www.crystal.chem.uu.nl/distr/eval/
   Ringer - Molecular Motions - http://ucxray.berkeley.edu/ringer.htm

  ccp4: Software for Macromolecular Crystallography

    Coot

    CNS 1.2

    Global Phasing: SHARP/autoSHAPR and Buster-TNT

    mifit+

    phenix

    pymol

    Solve/Resolve

    Uppsala Software Factory (USF)

Synchrotron Sites

    APS, ALS, SSRL, & BNL

Other Resources

    Annomalous Scattering Coefficients

    EBI Tools

    PRODRG2 Server   
    IUPHAR
    libgen.org
    Free-Scores.Com - http://www.free-scores.com/index_uk.php3
    The Sheet Music Archive - http://www.sheetmusicarchive.net/
    Digital Mozart Edition - http://dme.mozarteum.at/DME/main/?
    Classical Scores.Com - http://www.classical-scores.com/free/index.php

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